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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015805719.1_cds_XP_016494039.1_8486
CDS Infomation

[gene=LOC107813303] [db_xref=GeneID:107813303] [protein=MADS-box protein SOC1-like isoform X2] [protein_id=XP_016494039.1] [location=join(880..929,4083..4167,4257..4318,4430..4529,4933..4974,5074..5115,5681..5833)] [gbkey=CDS]
Sequence

ATGGTGAGAGGAAAAACTCAGATGAGGCGTATAGAGAACGCGACAAGCAGCATGCAGGAG
ATAATCGAACGCTATAAGAGGCATTCTAAAGACAAATTTCTACCTGAAAACCAAGCAGTG
GGATACAATATGCAGCATTTGAAGCATGAGACAGCAAGTTTGATGAAGAAGATAGAACTT
CTTGAAACATCTAAAAGGAAACTCTTGGGAGAAGGTTTAGGGTCCTGTACCCTAGAAGAA
TTACAGCAAATAGAAAAACAGTTGGAGCGGAGTGTTAGCGCCATCCGGGCGCGAAAGATG
AAAGTCTTTAGGGAACAGATGGAAAGATTGAAAGCAAAGGGGAAAGACCTTGCAGTTGAA
AATGCAATGCTGAGGGAGAAGTTTGGAGGTCTTCAACAGAGACAAACATCAAGCGGAGAG
AAGGAAGGAGAAGTTATTTGTATAGAGGGAGGTAGCGATAAATCGGATGTGGAGACAGAA
TTGTTTATTGGACCACCTGATGAATGTAGAATAAGGCGTCCCTTACAGAACTGA

Peptide Sequence

PEP ID

XP_016494039.1
PEP Infomation

PREDICTED: MADS-box protein SOC1-like isoform X2 [Nicotiana tabacum]
Sequence

MVRGKTQMRRIENATSSMQEIIERYKRHSKDKFLPENQAVGYNMQHLKHETASLMKKIEL
LETSKRKLLGEGLGSCTLEELQQIEKQLERSVSAIRARKMKVFREQMERLKAKGKDLAVE
NAMLREKFGGLQQRQTSSGEKEGEVICIEGGSDKSDVETELFIGPPDECRIRRPLQN

Transcript Sequence

Gene sequence data has not been registered.